diff --git a/bin/cli-flags.js b/bin/cli-flags.js
index 6be21b614..94ee10d14 100644
--- a/bin/cli-flags.js
+++ b/bin/cli-flags.js
@@ -1,3 +1,9 @@
+/**
+ * This file was automatically generated.
+ * DO NOT MODIFY BY HAND.
+ * Run `yarn special-lint-fix` to update
+ */
+
 module.exports = {
 	amd: {
 		types: ["boolean"],
diff --git a/tooling/generate-cli-flags.js b/tooling/generate-cli-flags.js
index 6063e3cfb..03e58a759 100644
--- a/tooling/generate-cli-flags.js
+++ b/tooling/generate-cli-flags.js
@@ -140,8 +140,16 @@ const prettierConfig = prettier.resolveConfig.sync(cliFlagsPath);
 
 fs.writeFileSync(
 	cliFlagsPath,
-	prettier.format(`module.exports = ${JSON.stringify(flags, null, 2)};`, {
-		...prettierConfig,
-		parser: "babel"
-	})
+	prettier.format(
+		`/**
+ * This file was automatically generated.
+ * DO NOT MODIFY BY HAND.
+ * Run \`yarn special-lint-fix\` to update
+ */\n
+  module.exports = ${JSON.stringify(flags, null, 2)};`,
+		{
+			...prettierConfig,
+			parser: "babel"
+		}
+	)
 );